「PCR primers cp rbcL」の版間の差分
提供: 広島大学デジタル博物館
ナビゲーションに移動検索に移動 (→rbcL) |
(→rbcL) |
||
172行目: | 172行目: | ||
| trnRn | | trnRn | ||
| GGGTTAGAAG GGATTCGAAC CCTTGAC | | GGGTTAGAAG GGATTCGAAC CCTTGAC | ||
+ | | Manhart (1994); Tsubota et al. (1999) | ||
+ | | Bryopytes | ||
+ | |- | ||
+ | | rbcL | ||
+ | | Reverse | ||
+ | | trnR66R | ||
+ | | GAAGGGATTC GAACCCTTG | ||
+ | | Tsubota et al. (1999) | ||
+ | | Bryopytes | ||
+ | |- | ||
+ | | rbcL | ||
+ | | Reverse | ||
+ | | trnR24R | ||
+ | | CTCTAATCCA CTGAGCTACA | ||
| Tsubota et al. (1999) | | Tsubota et al. (1999) | ||
| Bryopytes | | Bryopytes | ||
187行目: | 201行目: | ||
| CTTCATTACG TGCTTGTACA CAAGCTTCTA | | CTTCATTACG TGCTTGTACA CAAGCTTCTA | ||
| [[Inoue_et_al_2011|Inoue et al. (2011)]] | | [[Inoue_et_al_2011|Inoue et al. (2011)]] | ||
+ | | Bryopytes | ||
+ | |- | ||
+ | | rbcL | ||
+ | | Reverse | ||
+ | | rbcL1145R | ||
+ | | TTAATGCTGG CATATGCCAA AC | ||
+ | | Tsubota et al. (1999) | ||
| Bryopytes | | Bryopytes | ||
|- | |- |
2013年8月3日 (土) 12:47時点における版
広島大学 > デジタル自然史博物館 > 植物 > コケ植物(蘚苔類) > 情報
PCR primers
chloroplast
rbcL
Analyzed region | Forward / Reverse | Primer name | Sequence (5'–3') | References | For |
rbcL | Forward | atpB1011 | GATCTACTAC TTTAATTCCT GT | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | atpB370 | AGTTGAATCT AAAGGATCTA C | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | atbB175R | TGTTGAACTT CACAAGTAAC A | Manhart (1994) | Bryopytes |
rbcL | Forward | rbcL−130 | ACAATGATAC TGTTTGTTAT AG | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | rbcL−73 | ATACCAAAGA TGTTTTTTTA TAAG | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | rbcL7 | TGGATTTAAA GCTGGTGTTA AAG | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | HrL1 | ATGTCACCAC AAACGGAGAC TAAAGCAGG | Masuzaki et al. (2010) | Bryopytes |
rbcL | Forward | rbcL152 | GAATCCTCCA CTGGTACATG | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | rbcL218h | GACGATGCTA TGATCTCGAA GC | Tsubota et al. (2000) | Bryopytes |
rbcL | Forward | rbcL256 | GCTATGATCT TGAAGCAGTT CCTGGAGAAG | Tsubota et al. (2000) | Bryopytes |
rbcL | Forward | rbcL265 | ATTGCTTATG TTGCTTATCC | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | rbcL557 | GGTAGAGCTG TATATGAATG TCTTCGTGGT GG | Tsubota et al. (2000) | Bryopytes |
rbcL | Forward | rbcL549 | TGTCTTCGTG GTGGAC | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | rbcL862 | CAATGCATGC AGTTATTGAC | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | rbcL919G | CATGGTATGC ATTTCCGTGT A | Tsubota et al. (2001) | Bryopytes |
rbcL | Forward | rbcL921G | GGTATGCATT TCCGTGTATT AGC | Tsubota et al. (2001) | Bryopytes |
rbcL | Forward | rbcL968G | GAGATCATAT TCACGCTGGT AC | Tsubota et al. (2001) | Bryopytes |
rbcL | Forward | rbcL1117 | GGTATTCATG TTTGGC | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | rbcL1220 | GGAGCAGTTG CTAATAGAG | Tsubota et al. (1999) | Bryopytes |
rbcL | Forward | rbcL1276 | GGACGTGATC TTGCTCG | Tsubota et al. (1999) | Bryopytes |
rbcL | Reverse | zfpA546R | ATGATATCCA CATTCTTCAC A | Tsubota et al. (1999) | Bryopytes |
rbcL | Reverse | trnRn | GGGTTAGAAG GGATTCGAAC CCTTGAC | Manhart (1994); Tsubota et al. (1999) | Bryopytes |
rbcL | Reverse | trnR66R | GAAGGGATTC GAACCCTTG | Tsubota et al. (1999) | Bryopytes |
rbcL | Reverse | trnR24R | CTCTAATCCA CTGAGCTACA | Tsubota et al. (1999) | Bryopytes |
rbcL | Reverse | rbcL1346hR | GCAGCTAATT CAGGACTCC | Tsubota et al. (1999) | Bryopytes |
rbcL | Reverse | rbcL1301RL | CTTCATTACG TGCTTGTACA CAAGCTTCTA | Inoue et al. (2011) | Bryopytes |
rbcL | Reverse | rbcL1145R | TTAATGCTGG CATATGCCAA AC | Tsubota et al. (1999) | Bryopytes |
rbcL | Reverse | rbcL1098R | AACACCTGGT AAAGAAACC | Tsubota et al. (1999) | Bryopytes |
rbcL | Reverse | rbcL600R | GTGAAATCAA GTCCACCACG | Tsubota et al. (1999) | Bryopytes |
References
- Tsubota, H., N. Nakao, T. Arikawa, T. Yamaguchi, M. Higuchi, H. Deguchi & T. Seki. 1999. A preliminary phylogeny of Hypnales (Musci) as inferred from chloroplast rbcL sequence data. Bryol. Res. 7: 233-248.
- Tsubota, H., N. Nakao, T. Yamaguchi, T. Seki & H. Deguchi. 2000. Preliminary phylogenetic relationships of the genus Brotherella and its allied genera (Hypnales, Musci) based on chloroplast rbcL sequence data. J. Hattori Bot. Lab. 88: 79-99. [[[Abstract]>http://sciencelinks.jp/j-east/article/200021/000020002100A0795866.php]]
- Tsubota, H., H. Akiyama, T. Yamaguchi & H. Deguchi. 2001. Molecular phylogeny of the Sematophyllaceae (Hypnales, Musci) based on chloroplast rbcL sequences. J. Hattori Bot. Lab. 90: 221-240.
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