「PCR primers cp rbcL」の版間の差分

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61行目: 61行目:
 
| ATGTCACCAC AAACGGAGAC TAAAGCAGG
 
| ATGTCACCAC AAACGGAGAC TAAAGCAGG
 
| [[Masuzaki_Shimamura_Furuki_Tsubota_Yamaguchi_Haji_Deguchi_2010|Masuzaki et al. (2010)]]
 
| [[Masuzaki_Shimamura_Furuki_Tsubota_Yamaguchi_Haji_Deguchi_2010|Masuzaki et al. (2010)]]
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL152
 +
| GAATCCTCCA CTGGTACATG
 +
| Tsubota et al. (1999)
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL218h
 +
| GACGATGCTA TGATCTCGAA GC
 +
| Tsubota et al. (2000)
 
| Bryopytes
 
| Bryopytes
 
|-
 
|-
68行目: 82行目:
 
| GCTATGATCT TGAAGCAGTT CCTGGAGAAG
 
| GCTATGATCT TGAAGCAGTT CCTGGAGAAG
 
| Tsubota et al. (2000)
 
| Tsubota et al. (2000)
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL265
 +
| ATTGCTTATG TTGCTTATCC
 +
| Tsubota et al. (1999)
 
| Bryopytes
 
| Bryopytes
 
|-
 
|-
75行目: 96行目:
 
| GGTAGAGCTG TATATGAATG TCTTCGTGGT GG
 
| GGTAGAGCTG TATATGAATG TCTTCGTGGT GG
 
| Tsubota et al. (2000)
 
| Tsubota et al. (2000)
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL549
 +
| TGTCTTCGTG GTGGAC
 +
| Tsubota et al. (1999)
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL862
 +
| CAATGCATGC AGTTATTGAC
 +
| Tsubota et al. (1999)
 
| Bryopytes
 
| Bryopytes
 
|-
 
|-
82行目: 117行目:
 
| CATGGTATGC ATTTCCGTGT A
 
| CATGGTATGC ATTTCCGTGT A
 
| Tsubota et al. (2001)
 
| Tsubota et al. (2001)
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL921G
 +
| GGTATGCATT TCCGTGTATT AGC
 +
| Tsubota et al. (2001)
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL968G
 +
| GAGATCATAT TCACGCTGGT AC
 +
| Tsubota et al. (2001)
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL1117
 +
| GGTATTCATG TTTGGC
 +
| Tsubota et al. (1999)
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL1220
 +
| GGAGCAGTTG CTAATAGAG
 +
| Tsubota et al. (1999)
 +
| Bryopytes
 +
|-
 +
| rbcL
 +
| Forward
 +
| rbcL1276
 +
| GGACGTGATC TTGCTCG
 +
| Tsubota et al. (1999)
 
| Bryopytes
 
| Bryopytes
 
|-
 
|-

2013年8月3日 (土) 12:42時点における版

広島大学 > デジタル自然史博物館 > 植物 > コケ植物（蘚苔類） > 情報

PCR primers

chloroplast

rbcL

Table. Primers used for PCR amplification and sequencing
Analyzed region Forward / Reverse Primer name Sequence (5'–3') References For
rbcL Forward atpB1011 GATCTACTAC TTTAATTCCT GT Tsubota et al. (1999) Bryopytes
rbcL Forward atpB370 AGTTGAATCT AAAGGATCTA C Tsubota et al. (1999) Bryopytes
rbcL Forward atbB175R TGTTGAACTT CACAAGTAAC A Manhart (1994) Bryopytes
rbcL Forward rbcL−130 ACAATGATAC TGTTTGTTAT AG Tsubota et al. (1999) Bryopytes
rbcL Forward rbcL−73 ATACCAAAGA TGTTTTTTTA TAAG Tsubota et al. (1999) Bryopytes
rbcL Forward rbcL7 TGGATTTAAA GCTGGTGTTA AAG Tsubota et al. (1999) Bryopytes
rbcL Forward HrL1 ATGTCACCAC AAACGGAGAC TAAAGCAGG Masuzaki et al. (2010) Bryopytes
rbcL Forward rbcL152 GAATCCTCCA CTGGTACATG Tsubota et al. (1999) Bryopytes
rbcL Forward rbcL218h GACGATGCTA TGATCTCGAA GC Tsubota et al. (2000) Bryopytes
rbcL Forward rbcL256 GCTATGATCT TGAAGCAGTT CCTGGAGAAG Tsubota et al. (2000) Bryopytes
rbcL Forward rbcL265 ATTGCTTATG TTGCTTATCC Tsubota et al. (1999) Bryopytes
rbcL Forward rbcL557 GGTAGAGCTG TATATGAATG TCTTCGTGGT GG Tsubota et al. (2000) Bryopytes
rbcL Forward rbcL549 TGTCTTCGTG GTGGAC Tsubota et al. (1999) Bryopytes
rbcL Forward rbcL862 CAATGCATGC AGTTATTGAC Tsubota et al. (1999) Bryopytes
rbcL Forward rbcL919G CATGGTATGC ATTTCCGTGT A Tsubota et al. (2001) Bryopytes
rbcL Forward rbcL921G GGTATGCATT TCCGTGTATT AGC Tsubota et al. (2001) Bryopytes
rbcL Forward rbcL968G GAGATCATAT TCACGCTGGT AC Tsubota et al. (2001) Bryopytes
rbcL Forward rbcL1117 GGTATTCATG TTTGGC Tsubota et al. (1999) Bryopytes
rbcL Forward rbcL1220 GGAGCAGTTG CTAATAGAG Tsubota et al. (1999) Bryopytes
rbcL Forward rbcL1276 GGACGTGATC TTGCTCG Tsubota et al. (1999) Bryopytes
rbcL Reverse trnRn GGGTTAGAAG GGATTCGAAC CCTTGAC Tsubota et al. (1999) Bryopytes
rbcL Reverse rbcL1346hR GCAGCTAATT CAGGACTCC Tsubota et al. (1999) Bryopytes
rbcL Reverse rbcL1301RL CTTCATTACG TGCTTGTACA CAAGCTTCTA Inoue et al. (2011) Bryopytes
rbcL Reverse rbcL1098R AACACCTGGT AAAGAAACC Tsubota et al. (1999) Bryopytes
rbcL Reverse rbcL600R GTGAAATCAA GTCCACCACG Tsubota et al. (1999) Bryopytes

References

  • Tsubota, H., N. Nakao, T. Arikawa, T. Yamaguchi, M. Higuchi, H. Deguchi & T. Seki. 1999. A preliminary phylogeny of Hypnales (Musci) as inferred from chloroplast rbcL sequence data. Bryol. Res. 7: 233-248.
  • Tsubota, H., N. Nakao, T. Yamaguchi, T. Seki & H. Deguchi. 2000. Preliminary phylogenetic relationships of the genus Brotherella and its allied genera (Hypnales, Musci) based on chloroplast rbcL sequence data. J. Hattori Bot. Lab. 88: 79-99. [[[Abstract]>http://sciencelinks.jp/j-east/article/200021/000020002100A0795866.php]]
  • Tsubota, H., H. Akiyama, T. Yamaguchi & H. Deguchi. 2001. Molecular phylogeny of the Sematophyllaceae (Hypnales, Musci) based on chloroplast rbcL sequences. J. Hattori Bot. Lab. 90: 221-240.

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