「テンプレート:PCR primers References」の版間の差分

提供: 広島大学デジタル博物館
ナビゲーションに移動検索に移動
 
(2人の利用者による、間の13版が非表示)
1行目: 1行目:
 +
*[[Amamoto_Inoue_Alonso-Garcia_Yamaguchi_2022|Amamoto, K., Inoue, Y., Alonso-García, M. & Yamaguchi, T. 2022. New Localities for ''Chionoloma orthodontum'' (Pottiaceae, Bryophyta) in Japan. Acta Phytotax. Geobot. 73: 131-139.]]
 
*[[Bruni_Galimberti_Caridi_Scaccabarozzi_DeMattia_Casiraghi_Labra_2015|Bruni, I., Galimberti, A., Caridi, L., Scaccabarozzi, D., De Mattia, F., Casiraghi, M. & Labra, M.  2015.  A DNA barcoding approach to identify plant species in multiflower honey.  Food Chem. 170: 308-315.]]
 
*[[Bruni_Galimberti_Caridi_Scaccabarozzi_DeMattia_Casiraghi_Labra_2015|Bruni, I., Galimberti, A., Caridi, L., Scaccabarozzi, D., De Mattia, F., Casiraghi, M. & Labra, M.  2015.  A DNA barcoding approach to identify plant species in multiflower honey.  Food Chem. 170: 308-315.]]
 
*[[Buck_Goffinet_Shaw_2000|Buck, W. R., Goffinet, B. & Shaw, A. J.  2000.  Testing morphological concepts of orders of pleurocarpous mosses (Bryophyta) using phylogenetic reconstructions based on ''trn''L-''trn''F and ''rps''4 sequences.  Mol. Phylogenet. Evol. 16: 180-198.]]
 
*[[Buck_Goffinet_Shaw_2000|Buck, W. R., Goffinet, B. & Shaw, A. J.  2000.  Testing morphological concepts of orders of pleurocarpous mosses (Bryophyta) using phylogenetic reconstructions based on ''trn''L-''trn''F and ''rps''4 sequences.  Mol. Phylogenet. Evol. 16: 180-198.]]
 
*[[Demesure_et_al_1995|Demesure, B., Sodzi, N. & Petit, R. J.  1995.  A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants.  Mol. Ecol. 4: 129-131.]]
 
*[[Demesure_et_al_1995|Demesure, B., Sodzi, N. & Petit, R. J.  1995.  A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants.  Mol. Ecol. 4: 129-131.]]
 +
*[[Ford_et_al_2009|Ford, C. S., Ayres, K. L., Toomey, N., Haider, N., Van Alphen, S. J., Kelly, L. J., Wikström, N., Hollingsworth, P. M., Duff, R. J., Hoot, S. B., Cowan, R. S., Chase, M. W., & Wilkinson, M. J.  2009.  Selection of candidate coding DNA barcoding regions for use on land plants.  Bot. J. Linn. Soc. 159(1): 1-11.]]
 
*[[Hamilton_1999|Hamilton, M. B.  1999.  Four primer pairs for the amplification of chloroplast intergenic regions with intraspecific variation.  Mol. Ecol. 8: 521–523.]]
 
*[[Hamilton_1999|Hamilton, M. B.  1999.  Four primer pairs for the amplification of chloroplast intergenic regions with intraspecific variation.  Mol. Ecol. 8: 521–523.]]
 
*[[Handa_Nakahara_Tsubota_Deguchi_Nakano_2003|Handa, S., Nakahara, M., Tsubota, H., Deguchi, H. & Nakano, T.  2003.  A new aerial alga, ''Stichococcus ampulliformis'' sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan.  Phycol. Res. 51: 203-210.]]
 
*[[Handa_Nakahara_Tsubota_Deguchi_Nakano_2003|Handa, S., Nakahara, M., Tsubota, H., Deguchi, H. & Nakano, T.  2003.  A new aerial alga, ''Stichococcus ampulliformis'' sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan.  Phycol. Res. 51: 203-210.]]
18行目: 20行目:
 
*[[Nakahara_Handa_Watanabe_Deguchi_2004|Nakahara, M., Handa, S., Watanabe, S. & Deguchi, H.  2004a.  ''Choricystis minor'' as a new symbiont of simultaneous two-species association with ''Paramecium bursaria'' and implications for its phylogeny.  Symbiosis 36: 127-151.]]
 
*[[Nakahara_Handa_Watanabe_Deguchi_2004|Nakahara, M., Handa, S., Watanabe, S. & Deguchi, H.  2004a.  ''Choricystis minor'' as a new symbiont of simultaneous two-species association with ''Paramecium bursaria'' and implications for its phylogeny.  Symbiosis 36: 127-151.]]
 
*[[Nakahara_Tsubota_Handa_Watanabe_Deguchi_2004|Nakahara, M., Tsubota, H., Handa, S., Watanabe, S. & Deguchi, H.  2004b.  Molecular phylogeny of ''Chlorella''-like symbiotic algae in ''Paramecium bursaria'' based on 18S rRNA gene sequences.  Hikobia 14: 129-142.]]
 
*[[Nakahara_Tsubota_Handa_Watanabe_Deguchi_2004|Nakahara, M., Tsubota, H., Handa, S., Watanabe, S. & Deguchi, H.  2004b.  Molecular phylogeny of ''Chlorella''-like symbiotic algae in ''Paramecium bursaria'' based on 18S rRNA gene sequences.  Hikobia 14: 129-142.]]
 +
*[[Nakamura_Hongo_Matsuzaka_Nagasaki_Ikeda_Shioji_Shimizu_Tsubota_2022|Nakamura, H., Hongo, K., Matsuzaka, K., Nagasaki, R., Ikeda, S., Shioji, T., Shimizu, N. & Tsubota, H.  2022 (2023).  Checklist of planted trees on the Higashi-hiroshima Campus of Hiroshima University, Hiroshima Prefecture, SW Japan.  Bull. Hiroshima Univ. Museum 14: 75-92. (in Japanese) [中村 創・本郷圭祐・松坂啓佑・長﨑涼平・池田誠慈・塩路恒生・清水則雄・坪田博美.  2022 (2023).  広島大学東広島キャンパスの植栽樹木.  広島大学総合博物館研究報告 14: 75–92.]]]
 +
*[[中村・小山・ファン・中原-坪田・坪田_2023|Nakamura, H., Koyama, Y., Phan, Q. C., Nakahara-Tsubota, M. & Tsubota, H.  2023.  A note on vascular plants in Miyajima Island, Hiroshima Prefecture, SW Japan: ''Carpinus japonica'' and ''C. laxiflora'' (Betulaceae), and ''Lonicera affinis'' (Caprifoliaceae).  Hikobia 19: 37-47. (in Japanese) [中村 創・小山克輝・ファン=クイン=チ・中原-坪田美保・坪田博美.  2023.  広島県宮島の維管束植物:1. クマシデ,アカシデ,ハマニンドウ.  Hikobia 19(1): 37-47.]]]
 
*[[Newmaster_Ragupathy_2009|Newmaster, S. G. & Ragupathy, S.  2009.  Testing plant barcoding in a sister species complex of pantropical ''Acacias'' (Mimosoideae, Fabaceae).  Mol. Ecol. Resour. 9 (Suppl. 1): 172-180.]]
 
*[[Newmaster_Ragupathy_2009|Newmaster, S. G. & Ragupathy, S.  2009.  Testing plant barcoding in a sister species complex of pantropical ''Acacias'' (Mimosoideae, Fabaceae).  Mol. Ecol. Resour. 9 (Suppl. 1): 172-180.]]
 
*[[Oguri_Yamaguchi_Tsubota_Deguchi_2003|Oguri, E., Yamaguchi, T., Tsubota, H. & Deguchi, H.  2003.  A preliminary phylogenetic study of the genus ''Leucobryum'' (Leucobryaceae, Musci) in Asia and the Pacific based on ITS and ''rbc''L sequences.  Hikobia 14(1): 45-53.]]
 
*[[Oguri_Yamaguchi_Tsubota_Deguchi_2003|Oguri, E., Yamaguchi, T., Tsubota, H. & Deguchi, H.  2003.  A preliminary phylogenetic study of the genus ''Leucobryum'' (Leucobryaceae, Musci) in Asia and the Pacific based on ITS and ''rbc''L sequences.  Hikobia 14(1): 45-53.]]
23行目: 27行目:
 
*[http://www.nature.com/nature/journal/v322/n6079/abs/322572a0.html Ohyama, K., Fukuzawa, H., Kohchi, T., Shirai, H., Sano, T., Sano, S., Umesono, K., Shiki, Y., Takeuchi, M., Chang, Z., Aota, S., Inokuchi, H. & Ozeki, H.  1986.  Chloroplast gene organization deduced from complete sequence of liverwort ''Marchantia polymorpha'' chloroplast DNA.  Nature 322: 572-574.]
 
*[http://www.nature.com/nature/journal/v322/n6079/abs/322572a0.html Ohyama, K., Fukuzawa, H., Kohchi, T., Shirai, H., Sano, T., Sano, S., Umesono, K., Shiki, Y., Takeuchi, M., Chang, Z., Aota, S., Inokuchi, H. & Ozeki, H.  1986.  Chloroplast gene organization deduced from complete sequence of liverwort ''Marchantia polymorpha'' chloroplast DNA.  Nature 322: 572-574.]
 
*[[Olsson_et_al_2009|Olsson, S., Buchbender, V., Enroth, J., Hedenäs, L., Huttunen, S. & Quandt, D. 2009. Evolution of the Neckeraceae (Bryophyta): resolving the backbone phylogeny and identifying ancestral character states. Syst. Biodivers. 7: 419–432.]]
 
*[[Olsson_et_al_2009|Olsson, S., Buchbender, V., Enroth, J., Hedenäs, L., Huttunen, S. & Quandt, D. 2009. Evolution of the Neckeraceae (Bryophyta): resolving the backbone phylogeny and identifying ancestral character states. Syst. Biodivers. 7: 419–432.]]
 +
*[[Pacak_Szweykowska-Kulinska_2000|Pacak, A. & Szweykowska-Kulińska, Z. 2000. Molecular data concerning the allopolyploid character and the origin of chloroplast and mitochondrial genomes in the liverwort species Pellia borealis. J. Plant Biotechnol. 2: 101–108.]]
 +
*[[Phan_Nakahara-Tsubota_Inoue_Tsubota_2021|Phan, Q. C., Nakahara-Tsubota, M., Inoue, Y. & Tsubota, H.  2021.  New record of ''Dysphania pumilio'' (Amaranthaceae) for Hiroshima Prefecture, southwest Japan.  Hikobia 18: 145-156.]]
 
*[[Sang_Crawford_Stuessy_1997|Sang, T., Crawford, D. J. & Stuessy, T. F.  1997.  Chloroplast DNA phylogeny, reticulate evolution, and biogeography of ''Paeonia'' (Paeoniaceae).  Am. J. Bot. 84: 1120–1136.]]
 
*[[Sang_Crawford_Stuessy_1997|Sang, T., Crawford, D. J. & Stuessy, T. F.  1997.  Chloroplast DNA phylogeny, reticulate evolution, and biogeography of ''Paeonia'' (Paeoniaceae).  Am. J. Bot. 84: 1120–1136.]]
*[[Souza-Chies_Bittar_Nadot_Carter_Besin_Lejeune_1997|Souza-Chies, T. T., Bittar, G., Nadot, S., Carter, L., Besin, E. & Lejeune, B.  1997.  Phylogenetic analysis of Iridaceae with parsimony and distance methods using the plastid gene ''rps''4.  Pl. Syst. Evol. 204: 109–123.]]
+
*[[Souza-Chies_Bittar_Nadot_Carter_Besin_Lejeune_1997|Souza-Chies, T. T., Bittar, G., Nadot, S., Carter, L., Besin, E. & Lejeune, B.  1997.  Phylogenetic analysis of Iridaceae with parsimony and distance methods using the plastid gene ''rps''4.  Plant Syst. Evol. 204: 109–123.]]
 
*[[Taberlet_Gielly_Pautou_Bouvet_1991|Taberlet, P., Gielly, L., Pautou, G. & Bouvet, J.  1991.  Universal primers for amplification of three non-coding regions of chloroplast DNA.  Plant Mol. Biol. 17: 1105-1109.]]
 
*[[Taberlet_Gielly_Pautou_Bouvet_1991|Taberlet, P., Gielly, L., Pautou, G. & Bouvet, J.  1991.  Universal primers for amplification of three non-coding regions of chloroplast DNA.  Plant Mol. Biol. 17: 1105-1109.]]
 +
*[[Taberlet_Coissac_Pompanon_Gielly_Miquel_Valentini_Vermat_Corthier_Brochmann_Willerslev_2007|Taberlet, P., Coissac, E., Pompanon, F., Gielly, L., Miquel, C., Valentini, A., Vermat, T., Corthier, G., Brochmann, C. & Willerslev, E.  2007.  Power and limitations of the chloroplast ''trn'' L (UAA) intron for plant DNA barcoding.  Nucl. Acids Res. 35(3): e14.]]
 
*[[Tate_Simpson_2003|Tate, J. A. & Simpson, B. B.  2003.  Paraphyly of ''Tarasa'' (Malvaceae) and diverse origins of the polyploid species.  Systematic Botany 28: 723-737.]]
 
*[[Tate_Simpson_2003|Tate, J. A. & Simpson, B. B.  2003.  Paraphyly of ''Tarasa'' (Malvaceae) and diverse origins of the polyploid species.  Systematic Botany 28: 723-737.]]
 
*[[Tsubota_Nakao_Arikawa_Yamaguchi_Higuchi_Deguchi_Seki_1999|Tsubota, H., Nakao, N., Arikawa, T., Yamaguchi, T., Higuchi, M., Deguchi, H. & Seki, T.  1999.  A preliminary phylogeny of Hypnales (Musci) as inferred from chloroplast ''rbc''L sequence data.  Bryol. Res. 7: 233-248.]]
 
*[[Tsubota_Nakao_Arikawa_Yamaguchi_Higuchi_Deguchi_Seki_1999|Tsubota, H., Nakao, N., Arikawa, T., Yamaguchi, T., Higuchi, M., Deguchi, H. & Seki, T.  1999.  A preliminary phylogeny of Hypnales (Musci) as inferred from chloroplast ''rbc''L sequence data.  Bryol. Res. 7: 233-248.]]
36行目: 43行目:
 
*[[坪田・池田・井上・内田・向井_2015|Tsubota, H., Ikeda, S., Inoue, Y., Uchida, S. & Mukai, S.  2015b.  Current status of ''Lysimachia sikokiana'' Miq. (Primulaceae) in Hiroshima Prefecture, SW Japan.  Hikobia 17(1): 81-88. [坪田博美・池田誠慈・井上侑哉・内田慎治・向井誠二.  2015b.  広島県のモロコシソウ''Lysimachia sikokiana'' Miq.の現状について.  Hikobia 17(1): 81-88.]]]
 
*[[坪田・池田・井上・内田・向井_2015|Tsubota, H., Ikeda, S., Inoue, Y., Uchida, S. & Mukai, S.  2015b.  Current status of ''Lysimachia sikokiana'' Miq. (Primulaceae) in Hiroshima Prefecture, SW Japan.  Hikobia 17(1): 81-88. [坪田博美・池田誠慈・井上侑哉・内田慎治・向井誠二.  2015b.  広島県のモロコシソウ''Lysimachia sikokiana'' Miq.の現状について.  Hikobia 17(1): 81-88.]]]
 
*[[Werner_et_al_2009|Werner, O., Patiño, J., González-Mancebo, J. M., Gabriel, R. M. A. & Ros, R. M. 2009. The taxonomic status and the geographical relationships of the Macaronesian endemic moss ''Fissidens luisieri'' (Fissidentaceae) based on DNA sequence data. Bryologist 112: 315–324.]]
 
*[[Werner_et_al_2009|Werner, O., Patiño, J., González-Mancebo, J. M., Gabriel, R. M. A. & Ros, R. M. 2009. The taxonomic status and the geographical relationships of the Macaronesian endemic moss ''Fissidens luisieri'' (Fissidentaceae) based on DNA sequence data. Bryologist 112: 315–324.]]
 +
*[[White_Bruns_Lee_Taylor_1990|White, T. J., Bruns, T., Lee, S. & Taylor, J.  1990.  Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics.  ''In'' Innis, M. A., Gelfand, D. H., Sninskey, J. J. & White, T. J. (eds.), PCR Protocols: A Guide to Methods and Applications, pp. 315-322.  Academic Press, Inc., San Diego.]]

2024年2月12日 (月) 22:50時点における最新版