「テンプレート:PCR primers References」の版間の差分

提供: 広島大学デジタル博物館
ナビゲーションに移動検索に移動
(2人の利用者による、間の27版が非表示)
1行目: 1行目:
 +
*[[Bruni_Galimberti_Caridi_Scaccabarozzi_DeMattia_Casiraghi_Labra_2015|Bruni, I., Galimberti, A., Caridi, L., Scaccabarozzi, D., De Mattia, F., Casiraghi, M. & Labra, M.  2015.  A DNA barcoding approach to identify plant species in multiflower honey.  Food Chem. 170: 308-315.]]
 
*[[Buck_Goffinet_Shaw_2000|Buck, W. R., Goffinet, B. & Shaw, A. J.  2000.  Testing morphological concepts of orders of pleurocarpous mosses (Bryophyta) using phylogenetic reconstructions based on ''trn''L-''trn''F and ''rps''4 sequences.  Mol. Phylogenet. Evol. 16: 180-198.]]
 
*[[Buck_Goffinet_Shaw_2000|Buck, W. R., Goffinet, B. & Shaw, A. J.  2000.  Testing morphological concepts of orders of pleurocarpous mosses (Bryophyta) using phylogenetic reconstructions based on ''trn''L-''trn''F and ''rps''4 sequences.  Mol. Phylogenet. Evol. 16: 180-198.]]
 +
*[[Demesure_et_al_1995|Demesure, B., Sodzi, N. & Petit, R. J.  1995.  A set of universal primers for amplification of polymorphic non-coding regions of mitochondrial and chloroplast DNA in plants.  Mol. Ecol. 4: 129-131.]]
 
*[[Hamilton_1999|Hamilton, M. B.  1999.  Four primer pairs for the amplification of chloroplast intergenic regions with intraspecific variation.  Mol. Ecol. 8: 521–523.]]
 
*[[Hamilton_1999|Hamilton, M. B.  1999.  Four primer pairs for the amplification of chloroplast intergenic regions with intraspecific variation.  Mol. Ecol. 8: 521–523.]]
 
*[[Handa_Nakahara_Tsubota_Deguchi_Nakano_2003|Handa, S., Nakahara, M., Tsubota, H., Deguchi, H. & Nakano, T.  2003.  A new aerial alga, ''Stichococcus ampulliformis'' sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan.  Phycol. Res. 51: 203-210.]]
 
*[[Handa_Nakahara_Tsubota_Deguchi_Nakano_2003|Handa, S., Nakahara, M., Tsubota, H., Deguchi, H. & Nakano, T.  2003.  A new aerial alga, ''Stichococcus ampulliformis'' sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan.  Phycol. Res. 51: 203-210.]]
 
*[http://www.mapress.com/phytotaxa/content/2014/f/pt00181p162.pdf Inoue, Y. & Tsubota, H.  2014.  On the systematic position of the genus ''Timmiella'' (Dicranidae, Bryopsida) and its allied genera, with the description of a new family Timmiellaceae.  Phytotaxa 181: 151–162.]
 
*[http://www.mapress.com/phytotaxa/content/2014/f/pt00181p162.pdf Inoue, Y. & Tsubota, H.  2014.  On the systematic position of the genus ''Timmiella'' (Dicranidae, Bryopsida) and its allied genera, with the description of a new family Timmiellaceae.  Phytotaxa 181: 151–162.]
 +
*[[Inoue_et_al_2011|Inoue, Y., Tsubota, H., Kubo, H., Uchida, S., Mukai, S., Shimamura, M. & Deguchi, H.  2011.  A note on ''Pottia intermedia'' (Turner) Fürnr. (Pottiaceae, Bryopsida) with special reference to its phylogeny and new localities in SW Japan.  Hikobia 16: 67–78.]]
 
*[[Inoue_Tsubota_Sato_Yamaguchi_2012|Inoue, Y., Tsubota, H., Sato, H. & Yamaguchi, T.  2012.  Phylogenetic note on ''Pachyneuropsis miyagii'' T.Yamag. (Pottiaceae, Bryophyta).  Hikobia 16: 221–228.]]
 
*[[Inoue_Tsubota_Sato_Yamaguchi_2012|Inoue, Y., Tsubota, H., Sato, H. & Yamaguchi, T.  2012.  Phylogenetic note on ''Pachyneuropsis miyagii'' T.Yamag. (Pottiaceae, Bryophyta).  Hikobia 16: 221–228.]]
 +
*[[Jordan_et_al_1996|Jordan, W.C., Courtney, M.W. & Neigel, J.E. 1996. Low levels of intraspecific genetic variation at a rapidly evolving chloroplast DNA locus in North American duckweeds (Lemnaceae). Am. J. Bot. 83: 430–439.]]
 +
*[[Kocher_White_1992|Kocher, T. D. & White, T. J.  1992.  Evolutionary analysis via PCR.  ''In'' Erlich, H. A. (ed.), PCR Technology: Principles and Applications for DNA Amplification, pp. 137–147.  Oxford University Press, New York.
 +
]]
 +
*[[Manhart_1994|Manhart, J. R.  1994.  Phylogenetic analysis of green plant rbcL sequences.  Mol. Phylogenet. Evol. 3(2): 114-127.]]
 
*[[Masuzaki_et_al_2010|Masuzaki, H., Shimamura, M., Furuki, T., Tsubota, H., Yamaguchi, T., A. M., Haji Mohamed & Deguchi, H.  2010.  Systematic position of the enigmatic liverwort ''Mizutania'' (Mizutaniaceae, Marchantiophyta) inferred from molecular phylogenetic analyses.  Taxon 59(2): 448-458.]]
 
*[[Masuzaki_et_al_2010|Masuzaki, H., Shimamura, M., Furuki, T., Tsubota, H., Yamaguchi, T., A. M., Haji Mohamed & Deguchi, H.  2010.  Systematic position of the enigmatic liverwort ''Mizutania'' (Mizutaniaceae, Marchantiophyta) inferred from molecular phylogenetic analyses.  Taxon 59(2): 448-458.]]
 +
*[[Masuzaki_et_al_2011|Masuzaki, H., Furuki, T., Dalton, P. J., Tsubota, H., Seppelt, R. D. & Deguchi, H. 2011. The phylogenetic position of ''Vandiemenia ratkowskiana'' (Metzgeriales, Marchantiophyta).  Hikobia 16: 51–57.]]
 +
*[[Medlin_Elwood_Stickel_Sogin_1988|Medlin, L., Elwood, H. J., Stickel, S. & Sogin, M. L.  1988.  The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions.  Gene 71: 491-499.
 +
]]
 +
*[[Nadot_et_al_1994|Nadot, S., Bajon, R. & Lejeune, B.  1994.  The chloroplast gene ''rps4'' as a tool for the study of Poaceae phylogeny.  Pl. Syst. Evol. 191: 27–38.]]
 +
*[[Nakahara_Handa_Watanabe_Deguchi_2004|Nakahara, M., Handa, S., Watanabe, S. & Deguchi, H.  2004a.  ''Choricystis minor'' as a new symbiont of simultaneous two-species association with ''Paramecium bursaria'' and implications for its phylogeny.  Symbiosis 36: 127-151.]]
 +
*[[Nakahara_Tsubota_Handa_Watanabe_Deguchi_2004|Nakahara, M., Tsubota, H., Handa, S., Watanabe, S. & Deguchi, H.  2004b.  Molecular phylogeny of ''Chlorella''-like symbiotic algae in ''Paramecium bursaria'' based on 18S rRNA gene sequences.  Hikobia 14: 129-142.]]
 +
*[[Newmaster_Ragupathy_2009|Newmaster, S. G. & Ragupathy, S.  2009.  Testing plant barcoding in a sister species complex of pantropical ''Acacias'' (Mimosoideae, Fabaceae).  Mol. Ecol. Resour. 9 (Suppl. 1): 172-180.]]
 
*[[Oguri_Yamaguchi_Tsubota_Deguchi_2003|Oguri, E., Yamaguchi, T., Tsubota, H. & Deguchi, H.  2003.  A preliminary phylogenetic study of the genus ''Leucobryum'' (Leucobryaceae, Musci) in Asia and the Pacific based on ITS and ''rbc''L sequences.  Hikobia 14(1): 45-53.]]
 
*[[Oguri_Yamaguchi_Tsubota_Deguchi_2003|Oguri, E., Yamaguchi, T., Tsubota, H. & Deguchi, H.  2003.  A preliminary phylogenetic study of the genus ''Leucobryum'' (Leucobryaceae, Musci) in Asia and the Pacific based on ITS and ''rbc''L sequences.  Hikobia 14(1): 45-53.]]
 
*[[Oguri_Yamaguchi_Tsubota_Deguchi_Murakami_2013|Oguri, E., Yamaguchi, T., Tsubota, H., Deguchi, H. & Murakami, N.  2013.  Geographical origin of ''Leucobryum boninense'' Sull. & Lesq. (Leucobryaceae, Musci) endemic to the Bonin Islands, Japan.  Ecol. Evol. 3(4): 753–762.]]  DOI: 10.1002/ece3.492.
 
*[[Oguri_Yamaguchi_Tsubota_Deguchi_Murakami_2013|Oguri, E., Yamaguchi, T., Tsubota, H., Deguchi, H. & Murakami, N.  2013.  Geographical origin of ''Leucobryum boninense'' Sull. & Lesq. (Leucobryaceae, Musci) endemic to the Bonin Islands, Japan.  Ecol. Evol. 3(4): 753–762.]]  DOI: 10.1002/ece3.492.
 
*[http://www.nature.com/nature/journal/v322/n6079/abs/322572a0.html Ohyama, K., Fukuzawa, H., Kohchi, T., Shirai, H., Sano, T., Sano, S., Umesono, K., Shiki, Y., Takeuchi, M., Chang, Z., Aota, S., Inokuchi, H. & Ozeki, H.  1986.  Chloroplast gene organization deduced from complete sequence of liverwort ''Marchantia polymorpha'' chloroplast DNA.  Nature 322: 572-574.]
 
*[http://www.nature.com/nature/journal/v322/n6079/abs/322572a0.html Ohyama, K., Fukuzawa, H., Kohchi, T., Shirai, H., Sano, T., Sano, S., Umesono, K., Shiki, Y., Takeuchi, M., Chang, Z., Aota, S., Inokuchi, H. & Ozeki, H.  1986.  Chloroplast gene organization deduced from complete sequence of liverwort ''Marchantia polymorpha'' chloroplast DNA.  Nature 322: 572-574.]
 +
*[[Olsson_et_al_2009|Olsson, S., Buchbender, V., Enroth, J., Hedenäs, L., Huttunen, S. & Quandt, D. 2009. Evolution of the Neckeraceae (Bryophyta): resolving the backbone phylogeny and identifying ancestral character states. Syst. Biodivers. 7: 419–432.]]
 
*[[Sang_Crawford_Stuessy_1997|Sang, T., Crawford, D. J. & Stuessy, T. F.  1997.  Chloroplast DNA phylogeny, reticulate evolution, and biogeography of ''Paeonia'' (Paeoniaceae).  Am. J. Bot. 84: 1120–1136.]]
 
*[[Sang_Crawford_Stuessy_1997|Sang, T., Crawford, D. J. & Stuessy, T. F.  1997.  Chloroplast DNA phylogeny, reticulate evolution, and biogeography of ''Paeonia'' (Paeoniaceae).  Am. J. Bot. 84: 1120–1136.]]
 
*[[Souza-Chies_Bittar_Nadot_Carter_Besin_Lejeune_1997|Souza-Chies, T. T., Bittar, G., Nadot, S., Carter, L., Besin, E. & Lejeune, B.  1997.  Phylogenetic analysis of Iridaceae with parsimony and distance methods using the plastid gene ''rps''4.  Pl. Syst. Evol. 204: 109–123.]]
 
*[[Souza-Chies_Bittar_Nadot_Carter_Besin_Lejeune_1997|Souza-Chies, T. T., Bittar, G., Nadot, S., Carter, L., Besin, E. & Lejeune, B.  1997.  Phylogenetic analysis of Iridaceae with parsimony and distance methods using the plastid gene ''rps''4.  Pl. Syst. Evol. 204: 109–123.]]
 
*[[Taberlet_Gielly_Pautou_Bouvet_1991|Taberlet, P., Gielly, L., Pautou, G. & Bouvet, J.  1991.  Universal primers for amplification of three non-coding regions of chloroplast DNA.  Plant Mol. Biol. 17: 1105-1109.]]
 
*[[Taberlet_Gielly_Pautou_Bouvet_1991|Taberlet, P., Gielly, L., Pautou, G. & Bouvet, J.  1991.  Universal primers for amplification of three non-coding regions of chloroplast DNA.  Plant Mol. Biol. 17: 1105-1109.]]
 +
*[[Taberlet_Coissac_Pompanon_Gielly_Miquel_Valentini_Vermat_Corthier_Brochmann_Willerslev_2007|Taberlet, P., Coissac, E., Pompanon, F., Gielly, L., Miquel, C., Valentini, A., Vermat, T., Corthier, G., Brochmann, C. & Willerslev, E.  2007.  Power and limitations of the chloroplast ''trn'' L (UAA) intron for plant DNA barcoding.  Nucl. Acids Res. 35(3): e14.]]
 +
*[[Tate_Simpson_2003|Tate, J. A. & Simpson, B. B.  2003.  Paraphyly of ''Tarasa'' (Malvaceae) and diverse origins of the polyploid species.  Systematic Botany 28: 723-737.]]
 
*[[Tsubota_Nakao_Arikawa_Yamaguchi_Higuchi_Deguchi_Seki_1999|Tsubota, H., Nakao, N., Arikawa, T., Yamaguchi, T., Higuchi, M., Deguchi, H. & Seki, T.  1999.  A preliminary phylogeny of Hypnales (Musci) as inferred from chloroplast ''rbc''L sequence data.  Bryol. Res. 7: 233-248.]]
 
*[[Tsubota_Nakao_Arikawa_Yamaguchi_Higuchi_Deguchi_Seki_1999|Tsubota, H., Nakao, N., Arikawa, T., Yamaguchi, T., Higuchi, M., Deguchi, H. & Seki, T.  1999.  A preliminary phylogeny of Hypnales (Musci) as inferred from chloroplast ''rbc''L sequence data.  Bryol. Res. 7: 233-248.]]
 
*[[Tsubota_Nakao_Yamaguchi_Seki_Deguchi_2000|Tsubota, H., Nakao, N., Yamaguchi, T., Seki, T. & Deguchi, H.  2000.  Preliminary phylogenetic relationships of the genus ''Brotherella'' and its allied genera (Hypnales, Musci) based on chloroplast ''rbc''L sequence data.  J. Hattori Bot. Lab. 88: 79-99.]]  [http://sciencelinks.jp/j-east/article/200021/000020002100A0795866.php Abstract]
 
*[[Tsubota_Nakao_Yamaguchi_Seki_Deguchi_2000|Tsubota, H., Nakao, N., Yamaguchi, T., Seki, T. & Deguchi, H.  2000.  Preliminary phylogenetic relationships of the genus ''Brotherella'' and its allied genera (Hypnales, Musci) based on chloroplast ''rbc''L sequence data.  J. Hattori Bot. Lab. 88: 79-99.]]  [http://sciencelinks.jp/j-east/article/200021/000020002100A0795866.php Abstract]
17行目: 34行目:
 
*[[Tsubota_Kubo_Takeuchi_Nakahara-Tsubota_Inoue_Uchida_Mukai_2012|Tsubota, H., Kubo, H., Takeuchi, K., Nakahara-Tsubota, M., Inoue, Y., Uchida, S. & Mukai, S.  2012.  Notes on naturalized plants in Hiroshima Prefecture: 3. New locality and nrITS variation of ''Lactuca serriola'' L. (Asteraceae).  Hikobia 16: 197-202 (in Japanese with English Abstract and Tables).]] [[坪田・久保・武内・中原-坪田・井上・内田・向井_2012|[坪田博美・久保晴盛・武内一恵・中原-坪田美保・井上侑哉・内田慎治・向井誠二.  2012.  広島の帰化植物3.トゲヂシャとマルバトゲヂシャ.  Hikobia 16: 197-202.]]]
 
*[[Tsubota_Kubo_Takeuchi_Nakahara-Tsubota_Inoue_Uchida_Mukai_2012|Tsubota, H., Kubo, H., Takeuchi, K., Nakahara-Tsubota, M., Inoue, Y., Uchida, S. & Mukai, S.  2012.  Notes on naturalized plants in Hiroshima Prefecture: 3. New locality and nrITS variation of ''Lactuca serriola'' L. (Asteraceae).  Hikobia 16: 197-202 (in Japanese with English Abstract and Tables).]] [[坪田・久保・武内・中原-坪田・井上・内田・向井_2012|[坪田博美・久保晴盛・武内一恵・中原-坪田美保・井上侑哉・内田慎治・向井誠二.  2012.  広島の帰化植物3.トゲヂシャとマルバトゲヂシャ.  Hikobia 16: 197-202.]]]
 
*[[坪田・久保・大野・井上・中原-坪田・武内・松井・内田・向井_2013‎|Tsubota, H., Kubo, H., Ohno, A., Inoue, Y., Nakahara-Tsubota, M., Takeuchi, K., Matsui, K., Uchida, S. & Mukai, S.  2013.  Notes on naturalized plants in Hiroshima Prefecture: 4. New locality and phylogeny of ''Sisymbrium orientale'' L. (Brassicaceae) and its related species.  Hikobia 16: 321-334. [坪田博美・久保晴盛・大野彰洋・井上侑哉・中原-坪田美保・武内一恵・松井健一・内田慎治・向井誠二.  2013.  広島の帰化植物4．イヌカキネガラシおよびその近縁種.  Hikobia 16: 321-334.]]]
 
*[[坪田・久保・大野・井上・中原-坪田・武内・松井・内田・向井_2013‎|Tsubota, H., Kubo, H., Ohno, A., Inoue, Y., Nakahara-Tsubota, M., Takeuchi, K., Matsui, K., Uchida, S. & Mukai, S.  2013.  Notes on naturalized plants in Hiroshima Prefecture: 4. New locality and phylogeny of ''Sisymbrium orientale'' L. (Brassicaceae) and its related species.  Hikobia 16: 321-334. [坪田博美・久保晴盛・大野彰洋・井上侑哉・中原-坪田美保・武内一恵・松井健一・内田慎治・向井誠二.  2013.  広島の帰化植物4．イヌカキネガラシおよびその近縁種.  Hikobia 16: 321-334.]]]
−
*[[坪田・惠良・池田・久保・武内・中原-坪田・内田・向井_2015|'''Tsubota, H.''', Era, Y., Ikeda, S., Kubo, H., Takeuchi, K., Nakahara-Tsubota, M., Uchida, S. & Mukai, S.  2015a.  Notes on naturalized plants in Hiroshima Prefecture, SW Japan: 6. New locality of ''Cotula australis'' (Sieber ex Spreng.) Hook.f. (Asteraceae).  Hikobia 17(1): 73-79. ['''坪田博美'''・惠良友三郎・池田誠慈・久保晴盛・武内一恵・中原-坪田美保・内田慎治・向井誠二.  2015a.  広島の帰化植物6．マメカミツレ.  Hikobia 17(1): 73-79.]]]
+
*[[坪田・惠良・池田・久保・武内・中原-坪田・内田・向井_2015|Tsubota, H., Era, Y., Ikeda, S., Kubo, H., Takeuchi, K., Nakahara-Tsubota, M., Uchida, S. & Mukai, S.  2015a.  Notes on naturalized plants in Hiroshima Prefecture, SW Japan: 6. New locality of ''Cotula australis'' (Sieber ex Spreng.) Hook.f. (Asteraceae).  Hikobia 17(1): 73-79. [坪田博美・惠良友三郎・池田誠慈・久保晴盛・武内一恵・中原-坪田美保・内田慎治・向井誠二.  2015a.  広島の帰化植物6．マメカミツレ.  Hikobia 17(1): 73-79.]]]
−
#[[坪田・池田・井上・内田・向井_2015|'''Tsubota, H.''', Ikeda, S., Inoue, Y., Uchida, S. & Mukai, S.  2015b.  Current status of ''Lysimachia sikokiana'' Miq. (Primulaceae) in Hiroshima Prefecture, SW Japan.  Hikobia 17(1): 81-88. ['''坪田博美'''・池田誠慈・井上侑哉・内田慎治・向井誠二.  2015b.  広島県のモロコシソウ''Lysimachia sikokiana'' Miq.の現状について.  Hikobia 17(1): 81-88.]]]
+
*[[坪田・池田・井上・内田・向井_2015|Tsubota, H., Ikeda, S., Inoue, Y., Uchida, S. & Mukai, S.  2015b.  Current status of ''Lysimachia sikokiana'' Miq. (Primulaceae) in Hiroshima Prefecture, SW Japan.  Hikobia 17(1): 81-88. [坪田博美・池田誠慈・井上侑哉・内田慎治・向井誠二.  2015b.  広島県のモロコシソウ''Lysimachia sikokiana'' Miq.の現状について.  Hikobia 17(1): 81-88.]]]
 +
*[[Werner_et_al_2009|Werner, O., Patiño, J., González-Mancebo, J. M., Gabriel, R. M. A. & Ros, R. M. 2009. The taxonomic status and the geographical relationships of the Macaronesian endemic moss ''Fissidens luisieri'' (Fissidentaceae) based on DNA sequence data. Bryologist 112: 315–324.]]
 +
*[[White_Bruns_Lee_Taylor_1990|White, T. J., Bruns, T., Lee, S. & Taylor, J.  1990.  Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics.  ''In'' Innis, M. A., Gelfand, D. H., Sninskey, J. J. & White, T. J. (eds.), PCR Protocols: A Guide to Methods and Applications, pp. 315-322.  Academic Press, Inc., San Diego.]]

2021年12月24日 (金) 22:47時点における版

「https://www.digital-museum.hiroshima-u.ac.jp/~main/index.php?title=テンプレート:PCR_primers_References&oldid=123006」から取得